Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics

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Standard

Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics. / Harper, Andrea L.; McKinney, Lea Vig; Nielsen, Lene Rostgaard; Havlickova, Lenka; Li, Yi; Trick, Martin; Fraser, Fiona; Wang, Lihong; Fellgett, Alison; Sollars, Elizabeth S A; Janacek, Sophie H.; Downie, J. Allan; Buggs, Richard J A; Kjær, Erik Dahl; Bancroft, Ian.

I: Scientific Reports, Bind 6, 19335, 13.01.2016.

Publikation: Bidrag til tidsskrift › Tidsskriftartikel › Forskning › fagfællebedømt

Harvard

Harper, AL, McKinney, LV, Nielsen, LR, Havlickova, L, Li, Y, Trick, M, Fraser, F, Wang, L, Fellgett, A, Sollars, ESA, Janacek, SH, Downie, JA, Buggs, RJA, Kjær, ED & Bancroft, I 2016, 'Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics', Scientific Reports, bind 6, 19335. https://doi.org/10.1038/srep19335

APA

Harper, A. L., McKinney, L. V., Nielsen, L. R., Havlickova, L., Li, Y., Trick, M., Fraser, F., Wang, L., Fellgett, A., Sollars, E. S. A., Janacek, S. H., Downie, J. A., Buggs, R. J. A., Kjær, E. D., & Bancroft, I. (2016). Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics. Scientific Reports, 6, [19335]. https://doi.org/10.1038/srep19335

Vancouver

Harper AL, McKinney LV, Nielsen LR, Havlickova L, Li Y, Trick M o.a. Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics. Scientific Reports. 2016 jan. 13;6. 19335. https://doi.org/10.1038/srep19335

Author

Harper, Andrea L. ; McKinney, Lea Vig ; Nielsen, Lene Rostgaard ; Havlickova, Lenka ; Li, Yi ; Trick, Martin ; Fraser, Fiona ; Wang, Lihong ; Fellgett, Alison ; Sollars, Elizabeth S A ; Janacek, Sophie H. ; Downie, J. Allan ; Buggs, Richard J A ; Kjær, Erik Dahl ; Bancroft, Ian. / Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics. I: Scientific Reports. 2016 ; Bind 6.

Bibtex

@article{81eafcdfd0dd4b1994d8b25f680a3be9,
title = "Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics",
abstract = "Tree disease epidemics are a global problem, impacting food security, biodiversity and national economies. The potential for conservation and breeding in trees is hampered by complex genomes and long lifecycles, with most species lacking genomic resources. The European Ash tree Fraxinus excelsior is being devastated by the fungal pathogen Hymenoscyphus fraxineus, which causes ash dieback disease. Taking this system as an example and utilizing Associative Transcriptomics for the first time in a plant pathology study, we discovered gene sequence and gene expression variants across a genetic diversity panel scored for disease symptoms and identified markers strongly associated with canopy damage in infected trees. Using these markers we predicted phenotypes in a test panel of unrelated trees, successfully identifying individuals with a low level of susceptibility to the disease. Co-expression analysis suggested that pre-priming of defence responses may underlie reduced susceptibility to ash dieback.",
author = "Harper, {Andrea L.} and McKinney, {Lea Vig} and Nielsen, {Lene Rostgaard} and Lenka Havlickova and Yi Li and Martin Trick and Fiona Fraser and Lihong Wang and Alison Fellgett and Sollars, {Elizabeth S A} and Janacek, {Sophie H.} and Downie, {J. Allan} and Buggs, {Richard J A} and Kj{\ae}r, {Erik Dahl} and Ian Bancroft",
year = "2016",
month = jan,
day = "13",
doi = "10.1038/srep19335",
language = "English",
volume = "6",
journal = "Scientific Reports",
issn = "2045-2322",
publisher = "nature publishing group",

}

RIS

TY - JOUR

T1 - Molecular markers for tolerance of European ash (Fraxinus excelsior) to dieback disease identified using Associative Transcriptomics

AU - Harper, Andrea L.

AU - McKinney, Lea Vig

AU - Nielsen, Lene Rostgaard

AU - Havlickova, Lenka

AU - Li, Yi

AU - Trick, Martin

AU - Fraser, Fiona

AU - Wang, Lihong

AU - Fellgett, Alison

AU - Sollars, Elizabeth S A

AU - Janacek, Sophie H.

AU - Downie, J. Allan

AU - Buggs, Richard J A

AU - Kjær, Erik Dahl

AU - Bancroft, Ian

PY - 2016/1/13

Y1 - 2016/1/13

N2 - Tree disease epidemics are a global problem, impacting food security, biodiversity and national economies. The potential for conservation and breeding in trees is hampered by complex genomes and long lifecycles, with most species lacking genomic resources. The European Ash tree Fraxinus excelsior is being devastated by the fungal pathogen Hymenoscyphus fraxineus, which causes ash dieback disease. Taking this system as an example and utilizing Associative Transcriptomics for the first time in a plant pathology study, we discovered gene sequence and gene expression variants across a genetic diversity panel scored for disease symptoms and identified markers strongly associated with canopy damage in infected trees. Using these markers we predicted phenotypes in a test panel of unrelated trees, successfully identifying individuals with a low level of susceptibility to the disease. Co-expression analysis suggested that pre-priming of defence responses may underlie reduced susceptibility to ash dieback.

AB - Tree disease epidemics are a global problem, impacting food security, biodiversity and national economies. The potential for conservation and breeding in trees is hampered by complex genomes and long lifecycles, with most species lacking genomic resources. The European Ash tree Fraxinus excelsior is being devastated by the fungal pathogen Hymenoscyphus fraxineus, which causes ash dieback disease. Taking this system as an example and utilizing Associative Transcriptomics for the first time in a plant pathology study, we discovered gene sequence and gene expression variants across a genetic diversity panel scored for disease symptoms and identified markers strongly associated with canopy damage in infected trees. Using these markers we predicted phenotypes in a test panel of unrelated trees, successfully identifying individuals with a low level of susceptibility to the disease. Co-expression analysis suggested that pre-priming of defence responses may underlie reduced susceptibility to ash dieback.

UR - http://www.scopus.com/inward/record.url?scp=84954128405&partnerID=8YFLogxK

U2 - 10.1038/srep19335

DO - 10.1038/srep19335

M3 - Journal article

C2 - 26757823

AN - SCOPUS:84954128405

VL - 6

JO - Scientific Reports

JF - Scientific Reports

SN - 2045-2322

M1 - 19335

ER -

ID: 154412352